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ISCAS
2005
IEEE
129views Hardware» more  ISCAS 2005»
15 years 3 months ago
A reconfigurable architecture for scanning biosequence databases
—Unknown protein sequences are often compared to a set of known sequences (a database scan) to detect functional similarities. Even though efficient dynamic programming algorithm...
Timothy F. Oliver, Bertil Schmidt, Douglas L. Mask...
BMCBI
2011
14 years 1 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
MVA
2000
164views Computer Vision» more  MVA 2000»
14 years 11 months ago
Visual Screen: Transforming an Ordinary Screen into a Touch Screen
Touch screens are very convenient because one can directly point to where it is interesting. This paper presents an inexpensive technique to transform an ordinary screen into a to...
Zhengyou Zhang, Ying Shan
BMCBI
2008
85views more  BMCBI 2008»
14 years 10 months ago
Normalizing biomedical terms by minimizing ambiguity and variability
Background: One of the difficulties in mapping biomedical named entities, e.g. genes, proteins, chemicals and diseases, to their concept identifiers stems from the potential varia...
Yoshimasa Tsuruoka, John McNaught, Sophia Ananiado...
ISMB
1994
14 years 11 months ago
High Speed Pattern Matching in Genetic Data Base with Reconfigurable Hardware
Homologydetection in large data bases is probably the most time consuming operation in molecular genetic computing systems. Moreover, the progresses made all around the world conc...
Eric Lemoine, Joël Quinqueton, Jean Sallantin