: An efficient method for calculating the free energy of solvation of a (macro)molecule embedded in a continuum solvent is presented. It is based on the fully analytical evaluation...
Abstract. Applied Biosystems’ SOLiD system offers a low-cost alternative to the traditional Sanger method of DNA sequencing. We introduce two main algorithms of mapping SOLiD’...
Abstract. We propose a method to exponentially speed up computation of various fingerprints, such as the ones used to compute similarity and rarity in massive data sets. Rather the...
We present an efficient implementation of the Modified SParse Approximate Inverse (MSPAI) preconditioner. MSPAI generalizes the class of preconditioners based on Frobenius norm mi...
Thomas Huckle, A. Kallischko, A. Roy, M. Sedlacek,...
Abstract. We establish results for the problem of tracking a time-dependent manifold arising in realtime optimization by casting this as a parametric generalized equation. We demon...