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CPM
2006
Springer
145views Combinatorics» more  CPM 2006»
15 years 6 months ago
Approximation of RNA Multiple Structural Alignment
Abstract. In the context of non-coding RNA (ncRNA) multiple structural alignment, Davydov and Batzoglou introduced in [7] the problem of finding the largest nested linear graph tha...
Marcin Kubica, Romeo Rizzi, Stéphane Vialet...
VLDB
2000
ACM
155views Database» more  VLDB 2000»
15 years 6 months ago
ICICLES: Self-Tuning Samples for Approximate Query Answering
Approximate query answering systems provide very fast alternatives to OLAP systems when applications are tolerant to small errors in query answers. Current sampling-based approach...
Venkatesh Ganti, Mong-Li Lee, Raghu Ramakrishnan
ALGORITHMICA
2005
195views more  ALGORITHMICA 2005»
15 years 2 months ago
Bit-Parallel Witnesses and Their Applications to Approximate String Matching
We present a new bit-parallel technique for approximate string matching. We build on two previous techniques. The first one, BPM [Myers, J. of the ACM, 1999], searches for a patte...
Heikki Hyyrö, Gonzalo Navarro
SEBD
2003
144views Database» more  SEBD 2003»
15 years 4 months ago
Approximate Query Answering on Sensor Network Data Streams
Abstract. Sensor networks represent a non traditional source of information, as readings generated by sensors flow continuously, leading to an infinite stream of data. Traditiona...
Alfredo Cuzzocrea, Filippo Furfaro, Elio Masciari,...
BMCBI
2006
141views more  BMCBI 2006»
15 years 3 months ago
Asymptotic behaviour and optimal word size for exact and approximate word matches between random sequences
Background: The number of k-words shared between two sequences is a simple and effcient alignment-free sequence comparison method. This statistic, D2, has been used for the cluste...
Sylvain Forêt, Miriam R. Kantorovitz, Conrad...