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STOC
2000
ACM
156views Algorithms» more  STOC 2000»
15 years 4 months ago
Near optimal multiple alignment within a band in polynomial time
Multiple sequence alignment is a fundamental problem in computational biology. Because of its notorious difficulties, aligning sequences within a constant band (c-diagonal) is a ...
Ming Li, Bin Ma, Lusheng Wang
95
Voted
CDC
2008
IEEE
116views Control Systems» more  CDC 2008»
15 years 6 months ago
Effective sensing regions and connectivity of agents undergoing periodic relative motions
— Time-varying graphs are widely used to model communication and sensing in multi-agent systems such as mobile sensor networks and dynamic animal groups. Connectivity is often de...
Daniel T. Swain, Ming Cao, Naomi Ehrich Leonard
CSCW
2008
ACM
15 years 2 months ago
Mopping up: modeling wikipedia promotion decisions
This paper presents a model of the behavior of candidates for promotion to administrator status in Wikipedia. It uses a policy capture framework to highlight similarities and diff...
Moira Burke, Robert Kraut
CSB
2005
IEEE
114views Bioinformatics» more  CSB 2005»
15 years 6 months ago
Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes
Searching genomes for RNA secondary structure with computational methods has become an important approach to the annotation of non-coding RNAs. However, due to the lack of effici...
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fa...
BMCBI
2005
132views more  BMCBI 2005»
15 years 8 days ago
Kalign - an accurate and fast multiple sequence alignment algorithm
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Timo Lassmann, Erik L. L. Sonnhammer