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133
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BMCBI
2010
198views more  BMCBI 2010»
15 years 2 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
133
Voted
IEEEPACT
2006
IEEE
15 years 8 months ago
Fast, automatic, procedure-level performance tuning
This paper presents an automated performance tuning solution, which partitions a program into a number of tuning sections and finds the best combination of compiler options for e...
Zhelong Pan, Rudolf Eigenmann
SIGMOD
1997
ACM
127views Database» more  SIGMOD 1997»
15 years 6 months ago
Fast Parallel Similarity Search in Multimedia Databases
Most similarity search techniques map the data objects into some high-dimensional feature space. The similarity search then corresponds to a nearest-neighbor search in the feature...
Stefan Berchtold, Christian Böhm, Bernhard Br...
104
Voted
ICPR
2004
IEEE
16 years 3 months ago
A Hierarchical Projection Pursuit Clustering Algorithm
We define a cluster to be characterized by regions of high density separated by regions that are sparse. By observing the downward closure property of density, the search for inte...
Alexei D. Miasnikov, Jayson E. Rome, Robert M. Har...
117
Voted
HCW
1999
IEEE
15 years 6 months ago
Simulation of Task Graph Systems in Heterogeneous Computing Environments
This paper describes a simulation tool for the analysis of complex jobs described in the form of task graphs. The simulation procedure relies on the PN-based topological represent...
Noé Lopez-Benitez, Ja-Young Hyon