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73
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ICPR
2008
IEEE
15 years 11 months ago
Image retrieval with graph kernel on regions
In the framework of the interactive search in image databases, we are interested in similarity measures able to learn during the search and usable in real-time. Images are represe...
Justine Lebrun, Sylvie Philipp-Foliguet, Philippe ...
BMCBI
2010
205views more  BMCBI 2010»
14 years 9 months ago
A fast indexing approach for protein structure comparison
Background: Protein structure comparison is a fundamental task in structural biology. While the number of known protein structures has grown rapidly over the last decade, searchin...
Lei Zhang, James Bailey, Arun Siddharth Konagurthu...
92
Voted
BMCBI
2007
156views more  BMCBI 2007»
14 years 9 months ago
Accuracy of structure-based sequence alignment of automatic methods
Background: Accurate sequence alignments are essential for homology searches and for building three-dimensional structural models of proteins. Since structure is better conserved ...
Changhoon Kim, Byungkook Lee
BMCBI
2006
137views more  BMCBI 2006»
14 years 9 months ago
Genome BLAST distance phylogenies inferred from whole plastid and whole mitochondrion genome sequences
Background: Phylogenetic methods which do not rely on multiple sequence alignments are important tools in inferring trees directly from completely sequenced genomes. Here, we exte...
Alexander F. Auch, Stefan R. Henz, Barbara R. Holl...
ICALP
2005
Springer
15 years 3 months ago
Optimal Spaced Seeds for Faster Approximate String Matching
Filtering is a standard technique for fast approximate string matching in practice. In filtering, a quick first step is used to rule out almost all positions of a text as possib...
Martin Farach-Colton, Gad M. Landau, Süleyman...