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CIKM
1998
Springer
15 years 4 months ago
Efficient Enumeration of Frequent Sequences
In this paper we present SPADE, a new algorithm for fast discovery of Sequential Patterns. The existing solutions to this problem make repeated database scans, and use complex has...
Mohammed Javeed Zaki
BMCBI
2006
118views more  BMCBI 2006»
14 years 11 months ago
Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration
Background: There is an ever increasing rate of data made available on genetic variation, transcriptomes and proteomes. Similarly, a growing variety of bioinformatic programs are ...
Erdahl T. Teber, Edward Crawford, Kent B. Bolton, ...
BMCBI
2006
116views more  BMCBI 2006»
14 years 11 months ago
MICA: desktop software for comprehensive searching of DNA databases
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
William A. Stokes, Benjamin S. Glick
100
Voted
BMCBI
2006
153views more  BMCBI 2006»
14 years 11 months ago
2DDB - a bioinformatics solution for analysis of quantitative proteomics data
Background: We present 2DDB, a bioinformatics solution for storage, integration and analysis of quantitative proteomics data. As the data complexity and the rate with which it is ...
Lars Malmström, György Marko-Varga, Guni...
BMCBI
2006
145views more  BMCBI 2006»
14 years 11 months ago
Querying the public databases for sequences using complex keywords contained in the feature lines
Background: High throughput technologies often require the retrieval of large data sets of sequences. Retrieval of EMBL or GenBank entries using keywords is easy using tools such ...
Olivier Croce, Michaël Lamarre, Richard Chris...