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ISMB
1994
15 years 29 days ago
An Improved System for Exon Recognition and Gene Modeling in Human DNA Sequence
A new version of the GRAIL system (Uberbacher and Mural, 1991; Mural et al., 1992; Uberbacher et al., 1993), called GRAILII, has recently been developed (Xu et al., 1994). GRAILII...
Yin Xu, J. Ralph Einstein, Richard J. Mural, Manes...
BMCBI
2005
114views more  BMCBI 2005»
14 years 11 months ago
AutoFACT: An Automatic Functional Annotation and Classification Tool
Background: Assignment of function to new molecular sequence data is an essential step in genomics projects. The usual process involves similarity searches of a given sequence aga...
Liisa B. Koski, Michael W. Gray, B. Franz Lang, Ge...
95
Voted
SSDBM
2010
IEEE
185views Database» more  SSDBM 2010»
14 years 10 months ago
DESSIN: Mining Dense Subgraph Patterns in a Single Graph
Currently, a large amount of data can be best represented as graphs, e.g., social networks, protein interaction networks, etc. The analysis of these networks is an urgent research ...
Shirong Li, Shijie Zhang, Jiong Yang
NAR
2006
75views more  NAR 2006»
14 years 11 months ago
OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups
The OrthoMCL database (http://orthomcl.cbil.upenn. edu) houses ortholog group predictions for 55 spe10 cies, including 16 bacterial and 4 archaeal genomes representing phylogeneti...
Feng Chen, Aaron J. Mackey, Christian J. Stoeckert...
118
Voted
LION
2009
Springer
114views Optimization» more  LION 2009»
15 years 6 months ago
Substitution Matrices and Mutual Information Approaches to Modeling Evolution
Abstract. Substitution matrices are at the heart of Bioinformatics: sequence alignment, database search, phylogenetic inference, protein family classication are based on Blosum, P...
Stephan Kitchovitch, Yuedong Song, Richard C. van ...