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JCB
2007
92views more  JCB 2007»
14 years 9 months ago
Neighbor Joining Algorithms for Inferring Phylogenies via LCA Distances
Reconstructing phylogenetic trees efficiently and accurately from distance estimates is an ongoing challenge in computational biology from both practical and theoretical consider...
Ilan Gronau, Shlomo Moran
WOB
2004
14 years 11 months ago
A Multi-Neighbor-Joining Approach for Phylogenetic Tree Reconstruction and Visualization
ABSTRACT. The computationally challenging problem of reconstructing the phylogeny of a set of contemporary data, such as DNA sequences or morphological attributes, was treated by a...
Ana Estela Antunes da Silva, Wilfredo J. Puma-Vill...
ALGORITHMICA
1999
87views more  ALGORITHMICA 1999»
14 years 9 months ago
The Performance of Neighbor-Joining Methods of Phylogenetic Reconstruction
We analyze the performance of the popular class of neighbor-joining methods of phylogeny reconstruction. In particular, we find conditions under which these methods will determine ...
Kevin Atteson
RECOMB
2006
Springer
15 years 10 months ago
Maximal Accurate Forests from Distance Matrices
Abstract. We present a fast converging method for distance-based phylogenetic inference, which is novel in two respects. First, it is the only method (to our knowledge) to guarante...
Constantinos Daskalakis, Cameron Hill, Alexander J...
MDM
2009
Springer
118views Communications» more  MDM 2009»
15 years 4 months ago
DigestJoin: Exploiting Fast Random Reads for Flash-Based Joins
Abstract—Flash disks have been an emerging secondary storage media. In particular, there have been portable devices, multimedia players and laptop computers that are configured ...
Yu Li, Sai Tung On, Jianliang Xu, Byron Choi, Haib...