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» Fast distance multiplication of unit-Monge matrices
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93
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SODA
2010
ACM
162views Algorithms» more  SODA 2010»
16 years 23 days ago
Fast distance multiplication of unit-Monge matrices
Alexander Tiskin
115
Voted
BMCBI
2006
137views more  BMCBI 2006»
15 years 3 months ago
Genome BLAST distance phylogenies inferred from whole plastid and whole mitochondrion genome sequences
Background: Phylogenetic methods which do not rely on multiple sequence alignments are important tools in inferring trees directly from completely sequenced genomes. Here, we exte...
Alexander F. Auch, Stefan R. Henz, Barbara R. Holl...
128
Voted
KELSI
2004
Springer
15 years 8 months ago
A Randomized Algorithm for Distance Matrix Calculations in Multiple Sequence Alignment
Multiple sequence alignment (MSA) is a vital problem in biology. Optimal alignment of multiple sequences becomes impractical even for a modest number of sequences [1] since the gen...
Sanguthevar Rajasekaran, Vishal Thapar, Hardik Dav...