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115
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WABI
2009
Springer
132views Bioinformatics» more  WABI 2009»
15 years 8 months ago
mpscan: Fast Localisation of Multiple Reads in Genomes
Abstract. With Next Generation Sequencers, sequence based transcriptomic or epigenomic assays yield millions of short sequence reads that need to be mapped back on a reference geno...
Eric Rivals, Leena Salmela, Petteri Kiiskinen, Pet...
DAC
2005
ACM
15 years 3 months ago
Partitioning-based approach to fast on-chip decap budgeting and minimization
This paper proposes a fast decoupling capacitance (decap) allocation and budgeting algorithm for both early stage decap estimation and later stage decap minimization in today’s ...
Hang Li, Zhenyu Qi, Sheldon X.-D. Tan, Lifeng Wu, ...
SC
2003
ACM
15 years 7 months ago
Multi-Constraint Mesh Partitioning for Contact/Impact Computations
We present a novel approach for decomposing contact/impact computations in which the mesh elements come in contact with each other during the course of the simulation. Effective d...
George Karypis
CIKM
2007
Springer
15 years 5 months ago
A fast unified optimal route query evaluation algorithm
We investigate the problem of how to evaluate, fast and efficiently, classes of optimal route queries on a massive graph in a unified framework. To evaluate a route query effectiv...
Edward P. F. Chan, Jie Zhang
91
Voted
GECCO
2007
Springer
155views Optimization» more  GECCO 2007»
15 years 8 months ago
The effect of user interaction mechanisms in multi-objective IGA
In this paper four mechanisms, fine and coarse grained fitness rating, linguistic evaluation and active user intervention are compared for use in the multi-objective IGA. The inte...
Alexandra Melike Brintrup, Hideyuki Takagi