Similarity search and similarity join on strings are important for applications such as duplicate detection, error detection, data cleansing, or comparison of biological sequences....
Background: Protein-protein interactions are critical for cellular functions. Recently developed computational approaches for predicting protein-protein interactions utilize co-ev...
Abstract-- We consider the Top-k Approximate Subtree Matching (TASM) problem: finding the k best matches of a small query tree, e.g., a DBLP article with 15 nodes, in a large docum...
Nikolaus Augsten, Denilson Barbosa, Michael H. B&o...
As more and more genomes are sequenced, evolutionary biologists are becoming increasingly interested in evolution at the level of whole genomes, in scenarios in which the genome e...
Krister M. Swenson, Mark Marron, Joel V. Earnest-D...
A method for measuring dissimilarities between cyclic strings is introduced. It computes a weighted mean between two (lower and upper) bounds of the exact cyclic edit distance, wh...