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BMCBI
2007
190views more  BMCBI 2007»
14 years 11 months ago
Discriminative motif discovery in DNA and protein sequences using the DEME algorithm
Background: Motif discovery aims to detect short, highly conserved patterns in a collection of unaligned DNA or protein sequences. Discriminative motif finding algorithms aim to i...
Emma Redhead, Timothy L. Bailey
BMCBI
2008
100views more  BMCBI 2008»
14 years 11 months ago
PatternLab for proteomics: a tool for differential shotgun proteomics
Background: A goal of proteomics is to distinguish between states of a biological system by identifying protein expression differences. Liu et al. demonstrated a method to perform...
Paulo C. Carvalho, Juliana S. G. Fischer, Emily I....
BMCBI
2010
156views more  BMCBI 2010»
14 years 11 months ago
Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments
Background: High-throughput sequencing technologies, such as the Illumina Genome Analyzer, are powerful new tools for investigating a wide range of biological and medical question...
James H. Bullard, Elizabeth Purdom, Kasper D. Hans...
IESS
2007
Springer
120views Hardware» more  IESS 2007»
15 years 5 months ago
Error Containment in the Time-Triggered System-On-a-Chip Architecture
Abstract: The time-triggered System-on-a-Chip (SoC) architecture provides a generic multicore system platform for a family of composable and dependable giga-scale SoCs. It supports...
Roman Obermaisser, Hermann Kopetz, Christian El Sa...
CIKM
2008
Springer
15 years 1 months ago
SNIF TOOL: sniffing for patterns in continuous streams
Continuous time-series sequence matching, specifically, matching a numeric live stream against a set of predefined pattern sequences, is critical for domains ranging from fire spr...
Abhishek Mukherji, Elke A. Rundensteiner, David C....