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» Feature Engineering for a Gene Regulation Prediction Task
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120
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BMCBI
2004
229views more  BMCBI 2004»
14 years 11 months ago
Automatic annotation of protein motif function with Gene Ontology terms
Background: Conserved protein sequence motifs are short stretches of amino acid sequence patterns that potentially encode the function of proteins. Several sequence pattern search...
Xinghua Lu, Chengxiang Zhai, Vanathi Gopalakrishna...
100
Voted
BMCBI
2006
127views more  BMCBI 2006»
14 years 11 months ago
A graph-search framework for associating gene identifiers with documents
Background: One step in the model organism database curation process is to find, for each article, the identifier of every gene discussed in the article. We consider a relaxation ...
William W. Cohen, Einat Minkov
BMCBI
2004
114views more  BMCBI 2004»
14 years 11 months ago
Profiled support vector machines for antisense oligonucleotide efficacy prediction
Background: This paper presents the use of Support Vector Machines (SVMs) for prediction and analysis of antisense oligonucleotide (AO) efficacy. The collected database comprises ...
Gustavo Camps-Valls, Alistair M. Chalk, Antonio J....
118
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ICDM
2009
IEEE
233views Data Mining» more  ICDM 2009»
15 years 6 months ago
Semi-Supervised Sequence Labeling with Self-Learned Features
—Typical information extraction (IE) systems can be seen as tasks assigning labels to words in a natural language sequence. The performance is restricted by the availability of l...
Yanjun Qi, Pavel Kuksa, Ronan Collobert, Kunihiko ...
CIKM
2009
Springer
15 years 6 months ago
Predicting the volume of comments on online news stories
On-line news agents provide commenting facilities for readers to express their views with regard to news stories. The number of user supplied comments on a news article may be ind...
Manos Tsagkias, Wouter Weerkamp, Maarten de Rijke