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» Feature Engineering for a Gene Regulation Prediction Task
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NAR
2006
84views more  NAR 2006»
14 years 9 months ago
Zinc Finger Tools: custom DNA-binding domains for transcription factors and nucleases
Individual zinc finger (ZF) domains that recognize DNA triplets with high specificity and affinity can be used to create designer transcription factors and nucleases that are spec...
Jeffrey G. Mandell, Carlos F. Barbas III
BMCBI
2006
172views more  BMCBI 2006»
14 years 10 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...
TREC
2003
14 years 11 months ago
Report on the TREC 2003 Experiment: Genomic Track
After retrieval, this simple strategy yield to an important improvement of the average precision: from 17.02 up to 35.80. Task II. Our approach is based on argumentative structurin...
Patrick Ruch, Gilles Cohen, Frédéric...
BMCBI
2008
147views more  BMCBI 2008»
14 years 10 months ago
Simple integrative preprocessing preserves what is shared in data sources
Background: Bioinformatics data analysis toolbox needs general-purpose, fast and easily interpretable preprocessing tools that perform data integration during exploratory data ana...
Abhishek Tripathi, Arto Klami, Samuel Kaski
NAR
2011
290views Computer Vision» more  NAR 2011»
14 years 20 days ago
AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies
Phytohormone studies enlightened our knowledge of plant responses to various changes. To provide a systematic and comprehensive view of genes participating in plant hormonal regul...
Zhiqiang Jiang, Xiao-Chuan Liu, Zhiyu Peng, Yinan ...