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DYNAMO
2000
87views more  DYNAMO 2000»
13 years 7 months ago
Derive: a tool that automatically reverse-engineers instruction encodings
Many binary tools, such as disassemblers, dynamiccode generation systems, and executable code rewriters, need to understand how machine instructions are encoded. Unfortunately, sp...
Dawson R. Engler, Wilson C. Hsieh
SIGIR
2010
ACM
13 years 6 months ago
Optimal meta search results clustering
By analogy with merging documents rankings, the outputs from multiple search results clustering algorithms can be combined into a single output. In this paper we study the feasibi...
Claudio Carpineto, Giovanni Romano
BMCBI
2010
154views more  BMCBI 2010»
13 years 6 months ago
Binary image representation of a ligand binding site: its application to efficient sampling of a conformational ensemble
Background: Modelling the ligand binding site of a protein is an important component of understanding proteinligand interactions and is being actively studied. Even if the side ch...
Edon Sung, Sangsoo Kim, Whanchul Shin
BMCBI
2010
122views more  BMCBI 2010»
13 years 6 months ago
Genome3D: A viewer-model framework for integrating and visualizing multi-scale epigenomic information within a three-dimensional
Background: New technologies are enabling the measurement of many types of genomic and epigenomic information at scales ranging from the atomic to nuclear. Much of this new data i...
Thomas M. Asbury, Matt Mitman, Jijun Tang, W. Jim ...
BMCBI
2008
75views more  BMCBI 2008»
13 years 6 months ago
Re-searcher: a system for recurrent detection of homologous protein sequences
Background: Sequence searches are routinely employed to detect and annotate related proteins. However, a rapid growth of databases necessitates a frequent repetition of sequence s...
Valdemaras Repsys, Mindaugas Margelevicius, Ceslov...