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» Feature Identification: A Novel Approach and a Case Study
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119
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AB
2007
Springer
15 years 6 months ago
Analyzing Pathways Using SAT-Based Approaches
Abstract. A network of reactions is a commonly used paradigm for representing knowledge about a biological process. How does one understand such generic networks and answer queries...
Ashish Tiwari, Carolyn L. Talcott, Merrill Knapp, ...
120
Voted
INFOCOM
2009
IEEE
15 years 7 months ago
Minimizing End-to-End Delay: A Novel Routing Metric for Multi-Radio Wireless Mesh Networks
—This paper studies how to select a path with the minimum cost in terms of expected end-to-end delay (EED) in a multi-radio wireless mesh network. Different from the previous eff...
Hongkun Li, Yu Cheng, Chi Zhou, Weihua Zhuang
BMCBI
2008
126views more  BMCBI 2008»
15 years 19 days ago
NITPICK: peak identification for mass spectrometry data
Background: The reliable extraction of features from mass spectra is a fundamental step in the automated analysis of proteomic mass spectrometry (MS) experiments. Results: This co...
Bernhard Y. Renard, Marc Kirchner, Hanno Steen, Ju...
BMCBI
2008
143views more  BMCBI 2008»
15 years 19 days ago
Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering
Background: The identification and study of proteins from metagenomic datasets can shed light on the roles and interactions of the source organisms in their communities. However, ...
Shibu Yooseph, Weizhong Li, Granger G. Sutton
82
Voted
CSB
2004
IEEE
110views Bioinformatics» more  CSB 2004»
15 years 4 months ago
SPIDER: Software for Protein Identification from Sequence Tags with De Novo Sequencing Error
For the identification of novel proteins using MS/MS, de novo sequencing software computes one or several possible amino acid sequences (called sequence tags) for each MS/MS spect...
Yonghua Han, Bin Ma, Kaizhong Zhang