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BMCBI
2005
97views more  BMCBI 2005»
14 years 11 months ago
Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data
Background: As genomes evolve after speciation, gene content, coding sequence, gene expression, and splicing all diverge with time from ancestors with close relatives. A minimum e...
Roald Rossnes, Ingvar Eidhammer, David A. Liberles
105
Voted
BMCBI
2005
122views more  BMCBI 2005»
14 years 11 months ago
GenClust: A genetic algorithm for clustering gene expression data
Background: Clustering is a key step in the analysis of gene expression data, and in fact, many classical clustering algorithms are used, or more innovative ones have been designe...
Vito Di Gesù, Raffaele Giancarlo, Giosu&egr...
CIKM
2006
Springer
15 years 3 months ago
Mining coherent patterns from heterogeneous microarray data
Microarray technology is a powerful tool for geneticists to monitor interactions among tens of thousands of genes simultaneously. There has been extensive research on coherent sub...
Xiang Zhang, Wei Wang 0010
BMCBI
2007
166views more  BMCBI 2007»
14 years 11 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
CSB
2005
IEEE
126views Bioinformatics» more  CSB 2005»
15 years 5 months ago
Identifying Simple Discriminatory Gene Vectors with an Information Theory Approach
In the feature selection of cancer classification problems, many existing methods consider genes individually by choosing the top genes which have the most significant signal-to...
Zheng Yun, Kwoh Chee Keong