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» Finding Gapped Motifs by a Novel Evolutionary Algorithm
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DMIN
2006
126views Data Mining» more  DMIN 2006»
14 years 10 months ago
Comparison and Analysis of Mutation-based Evolutionary Algorithms for ANN Parameters Optimization
Mutation-based Evolutionary Algorithms, also known as Evolutionary Programming (EP) are commonly applied to Artificial Neural Networks (ANN) parameters optimization. This paper pre...
Kristina Davoian, Alexander Reichel, Wolfram-Manfr...
116
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BMCBI
2006
202views more  BMCBI 2006»
14 years 9 months ago
Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks
Background: The learning of global genetic regulatory networks from expression data is a severely under-constrained problem that is aided by reducing the dimensionality of the sea...
David J. Reiss, Nitin S. Baliga, Richard Bonneau
BMCBI
2010
103views more  BMCBI 2010»
14 years 9 months ago
PostMod: sequence based prediction of kinase-specific phosphorylation sites with indirect relationship
Background: Post-translational modifications (PTMs) have a key role in regulating cell functions. Consequently, identification of PTM sites has a significant impact on understandi...
Inkyung Jung, Akihisa Matsuyama, Minoru Yoshida, D...
BMCBI
2010
161views more  BMCBI 2010»
14 years 9 months ago
FRASS: the web-server for RNA structural comparison
Background: The impressive increase of novel RNA structures, during the past few years, demands automated methods for structure comparison. While many algorithms handle only small...
Svetlana Kirillova, Silvio C. E. Tosatto, Oliviero...
NIPS
2008
14 years 11 months ago
An Empirical Analysis of Domain Adaptation Algorithms for Genomic Sequence Analysis
We study the problem of domain transfer for a supervised classification task in mRNA splicing. We consider a number of recent domain transfer methods from machine learning, includ...
Gabriele Schweikert, Christian Widmer, Bernhard Sc...