The current standard for intra-domain network routing, Open Shortest Path First (OSPF), suffers from a number of problems--the tunable parameters (the weights) are hard to optimiz...
Jessica H. Fong, Anna C. Gilbert, Sampath Kannan, ...
Background: Multiple genome alignment is an important problem in bioinformatics. An important subproblem used by many multiple alignment approaches is that of aligning two multipl...
Background: Distance-based methods are popular for reconstructing evolutionary trees thanks to their speed and generality. A number of methods exist for estimating distances from ...
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
The rapid developing area of compressed sensing suggests that a sparse vector lying in a high dimensional space can be accurately and efficiently recovered from only a small set of...