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BMCBI
2011
14 years 11 months ago
Removing Noise From Pyrosequenced Amplicons
Background: In many environmental genomics applications a homologous region of DNA from a diverse sample is first amplified by PCR and then sequenced. The next generation sequenci...
Christopher Quince, Anders Lanzén, Russell ...
STACS
2007
Springer
15 years 10 months ago
A Deterministic Algorithm for Summarizing Asynchronous Streams over a Sliding Window
We consider the problem of maintaining aggregates over recent elements of a massive data stream. Motivated by applications involving network data, we consider asynchronous data str...
Costas Busch, Srikanta Tirthapura
BMCBI
2007
105views more  BMCBI 2007»
15 years 4 months ago
Text-derived concept profiles support assessment of DNA microarray data for acute myeloid leukemia and for androgen receptor sti
Background: High-throughput experiments, such as with DNA microarrays, typically result in hundreds of genes potentially relevant to the process under study, rendering the interpr...
Rob Jelier, Guido Jenster, Lambert C. J. Dorssers,...
UAI
2008
15 years 6 months ago
Learning Inclusion-Optimal Chordal Graphs
Chordal graphs can be used to encode dependency models that are representable by both directed acyclic and undirected graphs. This paper discusses a very simple and efficient algo...
Vincent Auvray, Louis Wehenkel
BMCBI
2011
14 years 8 months ago
Cell Subset Prediction for Blood Genomic Studies
Background: Genome-wide transcriptional profiling of patient blood samples offers a powerful tool to investigate underlying disease mechanisms and personalized treatment decisions...
Christopher R. Bolen, Mohamed Uduman, Steven H. Kl...