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» Finding Sequential Patterns from Large Sequence Data
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CSR
2006
Springer
15 years 1 months ago
Fast Motif Search in Protein Sequence Databases
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
Elena Zheleva, Abdullah N. Arslan
MSR
2005
ACM
15 years 3 months ago
Recovering system specific rules from software repositories
One of the most successful applications of static analysis based bug finding tools is to search the source code for violations of system-specific rules. These rules may describe h...
Chadd C. Williams, Jeffrey K. Hollingsworth
ICDE
2010
IEEE
226views Database» more  ICDE 2010»
15 years 9 months ago
Approximation Trade-Offs in Markovian Stream Processing: An Empirical Study
Abstract-- A large amount of the world's data is both sequential and imprecise. Such data is commonly modeled as Markovian streams; examples include words/sentences inferred f...
Julie Letchner, Christopher Re, Magdalena Balazins...
LWA
2004
14 years 11 months ago
Efficient Frequent Pattern Mining in Relational Databases
Data mining on large relational databases has gained popularity and its significance is well recognized. However, the performance of SQL based data mining is known to fall behind ...
Xuequn Shang, Kai-Uwe Sattler, Ingolf Geist
BIB
2008
88views more  BIB 2008»
14 years 9 months ago
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
The Molecular Evolutionary Genetics Analysis (MEGA) software is a desktop application designed for comparative analysis of homologous gene sequences either from multigene families...
Sudhir Kumar, Masatoshi Nei, Joel Dudley, Koichiro...