Graphs are an increasingly important data source, with such important graphs as the Internet and the Web. Other familiar graphs include CAD circuits, phone records, gene sequences...
Christopher R. Palmer, Phillip B. Gibbons, Christo...
In this paper we introduce graph-evolution rules, a novel type of frequency-based pattern that describe the evolution of large networks over time, at a local level. Given a sequenc...
Background: A major goal of computational studies of gene regulation is to accurately predict the expression of genes based on the cis-regulatory content of their promoters. The d...
Semantic indexing is a popular technique used to access and organize large amounts of unstructured text data. We describe an optimized implementation of semantic indexing and docu...
Background: Temporal gene expression profiles characterize the time-dynamics of expression of specific genes and are increasingly collected in current gene expression experiments....