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» Finding low-entropy sets and trees from binary data
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EVOW
2008
Springer
15 years 1 months ago
Improving the Performance of Hierarchical Classification with Swarm Intelligence
In this paper we propose a new method to improve the performance of hierarchical classification. We use a swarm intelligence algorithm to select the type of classification algorith...
Nicholas Holden, Alex Alves Freitas
NAR
2008
125views more  NAR 2008»
14 years 11 months ago
Phylogeny.fr: robust phylogenetic analysis for the non-specialist
Phylogenetic analyses are central to many research areas in biology and typically involve the identification of homologous sequences, their multiple alignment, the phylogenetic re...
Alexis Dereeper, V. Guignon, G. Blanc, Stép...
BMCBI
2010
164views more  BMCBI 2010»
14 years 11 months ago
Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions
Background: The pan-genome of a bacterial species consists of a core and an accessory gene pool. The accessory genome is thought to be an important source of genetic variability i...
Chad Laing, Cody Buchanan, Eduardo N. Taboada, Yon...
ICDE
2008
IEEE
204views Database» more  ICDE 2008»
16 years 1 months ago
Keyword Search on Spatial Databases
Many applications require finding objects closest to a specified location that contains a set of keywords. For example, online yellow pages allow users to specify an address and a ...
Ian De Felipe, Vagelis Hristidis, Naphtali Rishe
BMCBI
2008
139views more  BMCBI 2008»
14 years 11 months ago
A topological transformation in evolutionary tree search methods based on maximum likelihood combining p-ECR and neighbor joinin
Background: Inference of evolutionary trees using the maximum likelihood principle is NP-hard. Therefore, all practical methods rely on heuristics. The topological transformations...
Maozu Guo, Jian-Fu Li, Yang Liu