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BMCBI
2006
203views more  BMCBI 2006»
15 years 3 months ago
Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis dat
Background: A complete understanding of the regulatory mechanisms of gene expression is the next important issue of genomics. Many bioinformaticians have developed methods and alg...
Seon-Young Kim, YongSung Kim
126
Voted
BMCBI
2006
87views more  BMCBI 2006»
15 years 3 months ago
Phylogeny based discovery of regulatory elements
Background: Algorithms that locate evolutionarily conserved sequences have become powerful tools for finding functional DNA elements, including transcription factor binding sites;...
Jason Gertz, Justin C. Fay, Barak A. Cohen
122
Voted
COCOON
2006
Springer
15 years 7 months ago
The Complexity of Black-Box Ring Problems
We study the complexity of some computational problems on finite black-box rings whose elements are encoded as strings of a given length and the ring operations are performed by a ...
Vikraman Arvind, Bireswar Das, Partha Mukhopadhyay
AAECC
2006
Springer
102views Algorithms» more  AAECC 2006»
15 years 3 months ago
An effective proof of the well-foundedness of the multiset path ordering
The contribution of this paper is an effective proof of the well-foundedness of MPO, as a term of the Calculus of Inductive Constructions. This proof is direct, short and simple. ...
Solange Coupet-Grimal, William Delobel
119
Voted
SAC
2008
ACM
15 years 2 months ago
Output-sensitive algorithms for Tukey depth and related problems
The Tukey depth (Tukey 1975) of a point p with respect to a finite set S of points is the minimum number of elements of S contained in any closed halfspace that contains p. Algori...
David Bremner, Dan Chen, John Iacono, Stefan Lange...