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» Fixed-Parameter Algorithms in Phylogenetics
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78
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STOC
2006
ACM
129views Algorithms» more  STOC 2006»
15 years 10 months ago
Optimal phylogenetic reconstruction
One of the major tasks of evolutionary biology is the reconstruction of phylogenetic trees from molecular data. The evolutionary model is given by a Markov chain on the true evolu...
Constantinos Daskalakis, Elchanan Mossel, Sé...
97
Voted
CIAC
2010
Springer
281views Algorithms» more  CIAC 2010»
14 years 7 months ago
Parameterized Complexity of Even/Odd Subgraph Problems
We study the parameterized complexity of the problems of determining whether a graph contains a k-edge subgraph (k-vertex induced subgraph) that is a -graph for -graphs being one ...
Leizhen Cai, Boting Yang
83
Voted
EVOW
2008
Springer
15 years 17 hour ago
Reactive Stochastic Local Search Algorithms for the Genomic Median Problem
Abstract. The genomic median problem is an optimization problem inspired by a biological issue: it aims at finding the chromosome organization of the common ancestor to multiple li...
Renaud Lenne, Christine Solnon, Thomas Stützl...
98
Voted
ICISC
2004
112views Cryptology» more  ICISC 2004»
14 years 11 months ago
Improvement on Ha-Moon Randomized Exponentiation Algorithm
Randomized recoding on the exponent of an exponentiation computation into a signed-digit representation has been a well known countermeasure against some side-channel attacks. Howe...
Sung-Ming Yen, Chien-Ning Chen, Sang-Jae Moon, Jae...
97
Voted
CIAC
2010
Springer
251views Algorithms» more  CIAC 2010»
15 years 7 months ago
A parameterized algorithm for Chordal Sandwich
Given an arbitrary graph G = (V, E) and an additional set of admissible edges F, the Chordal Sandwich problem asks whether there exists a chordal graph (V, E F ) such that F F. ...
Pinar Heggernes, Federico Mancini, Jesper Nederlof...