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AMW
2011
14 years 7 months ago
Private Database Synthesis for Outsourced System Evaluation
The goal of this paper is to permit secure outsourced system evaluation. We propose a method for generating synthetic databases and obfuscating a workload of queries in order to pr...
Vani Gupta, Gerome Miklau, Neoklis Polyzotis
BMCBI
2006
146views more  BMCBI 2006»
15 years 4 months ago
A database application for pre-processing, storage and comparison of mass spectra derived from patients and controls
Background: Statistical comparison of peptide profiles in biomarker discovery requires fast, userfriendly software for high throughput data analysis. Important features are flexib...
Mark K. Titulaer, Ivar Siccama, Lennard J. Dekker,...
BMCBI
2010
138views more  BMCBI 2010»
15 years 4 months ago
A database and API for variation, dense genotyping and resequencing data
Background: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale rese...
Daniel Rios, William M. McLaren, Yuan Chen, Ewan B...
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BMCBI
2008
130views more  BMCBI 2008»
15 years 4 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
BMCBI
2008
204views more  BMCBI 2008»
15 years 4 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...