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» Flexible mapping of homology onto structure with Homolmapper
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BMCBI
2007
99views more  BMCBI 2007»
14 years 9 months ago
Flexible mapping of homology onto structure with Homolmapper
Background: Over the past decade, a number of tools have emerged for the examination of homology relationships among protein sequences in a structural context. Most recent softwar...
Nathan C. Rockwell, J. Clark Lagarias
86
Voted
ICAPR
2001
Springer
15 years 2 months ago
Grouping via the Matching of Repeated Patterns
Abstract. In this contribution, a novel and robust, geometry-based grouping strategy is proposed. Repeated, planar patterns in special relative positions are detected. The grouping...
Andreas Turina, Tinne Tuytelaars, Theo Moons, Luc ...
84
Voted
DAC
2007
ACM
15 years 10 months ago
Designer-Controlled Generation of Parallel and Flexible Heterogeneous MPSoC Specification
Programming multi-processor systems-on-chip (MPSoC) involves partitioning and mapping of sequential reference code onto multiple parallel processing elements. The immense potentia...
Pramod Chandraiah, Rainer Dömer
BMCBI
2006
159views more  BMCBI 2006»
14 years 9 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...
101
Voted
BMCBI
2008
101views more  BMCBI 2008»
14 years 9 months ago
Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related
Background: For many types of analyses, data about gene structure and locations of non-coding regions of genes are required. Although a vast amount of genomic sequence data is ava...
Oliver Keller, Florian Odronitz, Mario Stanke, Mar...