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BMCBI
2010
154views more  BMCBI 2010»
14 years 12 months ago
Binary image representation of a ligand binding site: its application to efficient sampling of a conformational ensemble
Background: Modelling the ligand binding site of a protein is an important component of understanding proteinligand interactions and is being actively studied. Even if the side ch...
Edon Sung, Sangsoo Kim, Whanchul Shin
NAR
2006
156views more  NAR 2006»
14 years 11 months ago
VOMBAT: prediction of transcription factor binding sites using variable order Bayesian trees
Variable order Markov models and variable order Bayesian trees have been proposed for the recognition of transcription factor binding sites, and it could be demonstrated that they...
Jan Grau, Irad E. Ben-Gal, Stefan Posch, Ivo Gross...
WWW
2007
ACM
16 years 15 days ago
A link-based ranking scheme for focused search
This paper introduces a novel link-based ranking algorithm based on a model of focused Web surfers. FocusedRank is described and compared to implementations of PageRank and Topic-...
Philip O'Brien, Tony Abou-Assaleh, Tapajyoti Das, ...
ADAPTIVE
2007
Springer
15 years 6 months ago
Adaptive Focused Crawling
The large amount of available information on the Web makes it hard for users to locate resources about particular topics of interest. Traditional search tools, e.g., search engines...
Alessandro Micarelli, Fabio Gasparetti
ICARIS
2004
Springer
15 years 5 months ago
Definition of MHC Supertypes Through Clustering of MHC Peptide Binding Repertoires
MHC molecules, also known in the human as human leukocyte antigens (HLA), display peptides on antigen presenting cell surfaces for subsequent T cell recognition. Identification of ...
Pedro A. Reche, Ellis L. Reinherz