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BMCBI
2007
130views more  BMCBI 2007»
14 years 12 months ago
Exploiting residue-level and profile-level interface propensities for usage in binding sites prediction of proteins
Background: Recognition of binding sites in proteins is a direct computational approach to the characterization of proteins in terms of biological and biochemical function. Residu...
Qiwen Dong, Xiaolong Wang, Lei Lin, Yi Guan
ESCIENCE
2005
IEEE
15 years 5 months ago
ScienceSifter: Facilitating Activity Awareness in Collaborative Research Groups through Focused Information Feeds
As the amount of scientific information available to researchers increases, the challenge of sifting through the information to find what is truly important to their work increase...
Linn Marks Collins, Ketan K. Mane, Mark L. B. Mart...
VISUALIZATION
2002
IEEE
15 years 4 months ago
A Radial Focus+Context Visualization for Multi-Dimensional Functions
The analysis of multidimensional functions is important in many engineering disciplines, and poses a major problem as the number of dimensions increases. Previous visualization ap...
Sanjini Jayaraman, Chris North
BMCBI
2010
156views more  BMCBI 2010»
14 years 12 months ago
PeakAnalyzer: Genome-wide annotation of chromatin binding and modification loci
Background: Functional genomic studies involving high-throughput sequencing and tiling array applications, such as ChIP-seq and ChIP-chip, generate large numbers of experimentally...
Mali Salmon-Divon, Heidi Dvinge, Kairi Tammoja, Pa...
BMCBI
2008
128views more  BMCBI 2008»
14 years 12 months ago
Finding sequence motifs with Bayesian models incorporating positional information: an application to transcription factor bindin
Background: Biologically active sequence motifs often have positional preferences with respect to a genomic landmark. For example, many known transcription factor binding sites (T...
Nak-Kyeong Kim, Kannan Tharakaraman, Leonardo Mari...