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BMCBI
2008
82views more  BMCBI 2008»
15 years 14 hour ago
Studying the functional conservation of cis-regulatory modules and their transcriptional output
Background: Cis-regulatory modules (CRMs) are distinct, genomic regions surrounding the target gene that can independently activate the promoter to drive transcription. The activa...
Denis C. Bauer, Timothy L. Bailey
WABI
2010
Springer
167views Bioinformatics» more  WABI 2010»
14 years 10 months ago
Quantifying the Strength of Natural Selection of a Motif Sequence
Quantification of selective pressures on regulatory sequences is a central question in studying the evolution of gene regulatory networks. Previous methods focus primarily on sing...
Chen-Hsiang Yeang
NDSS
1999
IEEE
15 years 4 months ago
An Algebra for Assessing Trust in Certification Chains
Open networks allow users to communicate without any prior arrangements such as contractual agreement or organisation membership. However, the very nature of open networks makes a...
Audun Jøsang
NAR
2011
232views Computer Vision» more  NAR 2011»
14 years 6 months ago
REDfly v3.0: toward a comprehensive database of transcriptional regulatory elements in Drosophila
The REDfly database of Drosophila transcriptional cis-regulatory elements provides the broadest and most comprehensive available resource for experimentally validated cis-regulato...
Steven M. Gallo, Dave T. Gerrard, David Miner, Mic...
BMCBI
2010
90views more  BMCBI 2010»
15 years 15 hour ago
PuTmiR: A database for extracting neighboring transcription factors of human microRNAs
Background: Some of the recent investigations in systems biology have revealed the existence of a complex regulatory network between genes, microRNAs (miRNAs) and transcription fa...
Sanghamitra Bandyopadhyay, Malay Bhattacharyya