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BMCBI
2007
115views more  BMCBI 2007»
15 years 3 months ago
A novel, fast, HMM-with-Duration implementation - for application with a new, pattern recognition informed, nanopore detector
Background: Hidden Markov Models (HMMs) provide an excellent means for structure identification and feature extraction on stochastic sequential data. An HMM-with-Duration (HMMwD) ...
Stephen Winters-Hilt, Carl Baribault
BMCBI
2004
97views more  BMCBI 2004»
15 years 3 months ago
Global features of sequences of bacterial chromosomes, plasmids and phages revealed by analysis of oligonucleotide usage pattern
Background: Oligonucleotide frequencies were shown to be conserved signatures for bacterial genomes, however, the underlying constraints have yet not been resolved in detail. In t...
Oleg N. Reva, Burkhard Tümmler
COMPSAC
2007
IEEE
15 years 10 months ago
On Identifying Bug Patterns in Aspect-Oriented Programs
Bug patterns are erroneous code idioms or bad coding practices that have been proved fail time and time again. They mainly arise from the misunderstanding of language features, th...
Sai Zhang, Jianjun Zhao
DAWAK
2005
Springer
15 years 9 months ago
Optimizing a Sequence of Frequent Pattern Queries
Discovery of frequent patterns is a very important data mining problem with numerous applications. Frequent pattern mining is often regarded as advanced querying where a user speci...
Mikolaj Morzy, Marek Wojciechowski, Maciej Zakrzew...
VLDB
1999
ACM
188views Database» more  VLDB 1999»
15 years 8 months ago
SPIRIT: Sequential Pattern Mining with Regular Expression Constraints
Discovering sequential patterns is an important problem in data mining with a host of application domains including medicine, telecommunications, and the World Wide Web. Conventio...
Minos N. Garofalakis, Rajeev Rastogi, Kyuseok Shim