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BMCBI
2010
96views more  BMCBI 2010»
15 years 3 hour ago
A statistical framework for differential network analysis from microarray data
Background: It has been long well known that genes do not act alone; rather groups of genes act in consort during a biological process. Consequently, the expression levels of gene...
Ryan Gill, Somnath Datta, Susmita Datta
BMCBI
2010
163views more  BMCBI 2010»
15 years 3 hour ago
Integration of open access literature into the RCSB Protein Data Bank using BioLit
Background: Biological data have traditionally been stored and made publicly available through a variety of on-line databases, whereas biological knowledge has traditionally been ...
Andreas Prlic, Marco A. Martinez, Dimitris Dimitro...
BMCBI
2010
277views more  BMCBI 2010»
15 years 2 hour ago
PCA2GO: a new multivariate statistics based method to identify highly expressed GO-Terms
Background: Several tools have been developed to explore and search Gene Ontology (GO) databases allowing efficient GO enrichment analysis and GO tree visualization. Nevertheless,...
Marc Bruckskotten, Mario Looso, Franz Cemic, Anne ...
BMCBI
2007
139views more  BMCBI 2007»
14 years 12 months ago
XSTREAM: A practical algorithm for identification and architecture modeling of tandem repeats in protein sequences
Background: Biological sequence repeats arranged in tandem patterns are widespread in DNA and proteins. While many software tools have been designed to detect DNA tandem repeats (...
Aaron M. Newman, James B. Cooper
CCR
2008
110views more  CCR 2008»
14 years 12 months ago
Operational comparison of available bandwidth estimation tools
The available bandwidth of a path directly impacts the performance of throughput sensitive applications, e.g., p2p content replication or podcasting. Several tools have been devis...
Guillaume Urvoy-Keller, Taoufik En-Najjary, Alessa...