Abstract. CBS is a Calculus of Biochemical Systems intended to allow the modelling of metabolic, signalling and regulatory networks in a natural and modular manner. In this paper w...
Background: A growing demand for tools to assist the building and analysis of biological networks exists in systems biology. We argue that the use of a formal approach is relevant...
This position paper argues that the operational modelling approaches from the formal methods community can be applied fruitfully within the systems biology domain. The results can ...
Nicola Bonzanni, K. Anton Feenstra, Wan Fokkink, E...
Process models capture tasks performed by agents together with their control flow. Building and analyzing such models is important but difficult in certain areas such as safety-cr...
Christophe Damas, Bernard Lambeau, Francois Roucou...
Executable UML allows precisely describing the software system at level of abstraction. The executable models can be translated to a less programming language completely or execute...