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WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
15 years 4 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
DAGSTUHL
2007
15 years 1 months ago
Exploiting the ASM method within the Model-driven Engineering paradigm
act notation, so separating the abstract syntax and semantics of the language constructs from their different concrete notations. Although the foundation constituents of the MDE a...
Angelo Gargantini, Elvinia Riccobene, Patrizia Sca...
IJCAI
2007
15 years 1 months ago
Cooperating Reasoning Processes: More than Just the Sum of Their Parts
Using the achievements of my research group over the last 30+ years, I provide evidence to support the following hypothesis: By complementing each other, cooperating reasoning pro...
Alan Bundy
DAGSTUHL
2001
15 years 1 months ago
An Overview of the GXL Graph Exchange Language
GXL (Graph eXchange Language) is designed to be a standard exchange format for graph-based tools. GXL is defined as an XML sublanguage, which offers support for exchanging instanc...
Andreas Winter, Bernt Kullbach, Volker Riediger
BMCBI
2007
147views more  BMCBI 2007»
14 years 11 months ago
Modeling biochemical transformation processes and information processing with Narrator
Background: Software tools that model and simulate the dynamics of biological processes and systems are becoming increasingly important. Some of these tools offer sophisticated gr...
Johannes J. Mandel, Hendrik Fuß, Niall M. Pa...