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CIKM
2005
Springer
15 years 9 months ago
Exact match search in sequence data using suffix trees
We study suitable indexing techniques to support efficient exact match search in large biological sequence databases. We propose a suffix tree (ST) representation, called STA-DF, ...
Mihail Halachev, Nematollaah Shiri, Anand Thamildu...
CPM
2005
Springer
206views Combinatorics» more  CPM 2005»
15 years 9 months ago
A Fast Algorithm for Approximate String Matching on Gene Sequences
Abstract. Approximate string matching is a fundamental and challenging problem in computer science, for which a fast algorithm is highly demanded in many applications including tex...
Zheng Liu, Xin Chen, James Borneman, Tao Jiang
DIS
2005
Springer
15 years 9 months ago
Movement Analysis of Medaka (Oryzias Latipes) for an Insecticide Using Decision Tree
Abstract. Behavioral sequences of the medaka (Oryzias latipes) were continuously investigated through an automatic image recognition system in response to medaka treated with the i...
Sengtai Lee, Jeehoon Kim, Jae-Yeon Baek, Man-Wi Ha...
DIS
2005
Springer
15 years 9 months ago
Exploring Predicate-Argument Relations for Named Entity Recognition in the Molecular Biology Domain
In this paper, the semantic relationships between a predicate and its arguments in terms of semantic roles are employed to improve lexical-based named entity recognition (NER) in t...
Tuangthong Wattarujeekrit, Nigel Collier
EUROCAST
2005
Springer
86views Hardware» more  EUROCAST 2005»
15 years 9 months ago
Convergence of Iterations
Convergence is a central problem in both computer science and in population biology. Will a program terminate? Will a population go to an equilibrium? In general these questions ar...
Paul Cull
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