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» Fractal Clustering for Microarray Data Analysis
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BMCBI
2010
125views more  BMCBI 2010»
14 years 9 months ago
NeatMap - non-clustering heat map alternatives in R
Background: The clustered heat map is the most popular means of visualizing genomic data. It compactly displays a large amount of data in an intuitive format that facilitates the ...
Satwik Rajaram, Yoshi Oono
BIBM
2009
IEEE
172views Bioinformatics» more  BIBM 2009»
15 years 2 months ago
Identifying Gene Signatures from Cancer Progression Data Using Ordinal Analysis
—A comprehensive understanding of cancer progression may shed light on genetic and molecular mechanisms of oncogenesis, and it may provide much needed information for effective d...
Yoon Soo Pyon, Jing Li
BMCBI
2006
149views more  BMCBI 2006»
14 years 9 months ago
HeatMapper: powerful combined visualization of gene expression profile correlations, genotypes, phenotypes and sample characteri
Background: Accurate interpretation of data obtained by unsupervised analysis of large scale expression profiling studies is currently frequently performed by visually combining s...
Roel G. W. Verhaak, Mathijs A. Sanders, Maarten A....
KDD
2004
ACM
108views Data Mining» more  KDD 2004»
15 years 10 months ago
Sleeved coclustering
A coCluster of a m?n matrix X is a submatrix determined by a subset of the rows and a subset of the columns. The problem of finding coClusters with specific properties is of inter...
Avraham A. Melkman, Eran Shaham
182
Voted
ICDE
2008
IEEE
141views Database» more  ICDE 2008»
15 years 11 months ago
A General Framework for Fast Co-clustering on Large Datasets Using Matrix Decomposition
Abstract-- Simultaneously clustering columns and rows (coclustering) of large data matrix is an important problem with wide applications, such as document mining, microarray analys...
Feng Pan, Xiang Zhang, Wei Wang 0010