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» Fractal Clustering for Microarray Data Analysis
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BMCBI
2010
193views more  BMCBI 2010»
14 years 4 months ago
Mayday - integrative analytics for expression data
Background: DNA Microarrays have become the standard method for large scale analyses of gene expression and epigenomics. The increasing complexity and inherent noisiness of the ge...
Florian Battke, Stephan Symons, Kay Nieselt
FPL
2003
Springer
128views Hardware» more  FPL 2003»
15 years 2 months ago
Case Study of a Functional Genomics Application
Although microarrays are already having a tremendous impact on biomedical science, they still present great computational challenges. We examine a particular problem involving the...
Tom Van Court, Martin C. Herbordt, Richard J. Bart...
BMCBI
2011
14 years 4 months ago
A Platform for Processing Expression of Short Time Series (PESTS)
Background: Time course microarray profiles examine the expression of genes over a time domain. They are necessary in order to determine the complete set of genes that are dynamic...
Anshu Sinha, Marianthi Markatou
BMCBI
2008
144views more  BMCBI 2008»
14 years 9 months ago
WGCNA: an R package for weighted correlation network analysis
Background: Correlation networks are increasingly being used in bioinformatics applications. For example, weighted gene co-expression network analysis is a systems biology method ...
Peter Langfelder, Steve Horvath
KDD
2004
ACM
158views Data Mining» more  KDD 2004»
15 years 10 months ago
A generalized maximum entropy approach to bregman co-clustering and matrix approximation
Co-clustering is a powerful data mining technique with varied applications such as text clustering, microarray analysis and recommender systems. Recently, an informationtheoretic ...
Arindam Banerjee, Inderjit S. Dhillon, Joydeep Gho...