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144
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JCB
2002
108views more  JCB 2002»
15 years 3 months ago
Fast and Accurate Phylogeny Reconstruction Algorithms Based on the Minimum-Evolution Principle
This paper investigates the standard ordinary least-squares version 24 and the balanced version 20 of the minimum evolution principle. For the standard version, we provide a greedy...
Richard Desper, Olivier Gascuel
138
Voted
NAR
2006
120views more  NAR 2006»
15 years 3 months ago
TreeDomViewer: a tool for the visualization of phylogeny and protein domain structure
Phylogenetic analysis and examination of protein domains allow accurate genome annotation and are invaluable to study proteins and protein complex evolution. However, two sequence...
Blaise T. F. Alako, Daphne Rainey, Harm Nijveen, J...
148
Voted
IMSCCS
2006
IEEE
15 years 9 months ago
GenomeBlast: A Web Tool for Small Genome Comparison
Comparative genomics has become an essential approach for identifying homologous gene candidates and their functions, and for studying genome evolution. We developed GenomeBlast, ...
Guoqing Lu, Liying Jiang, Resa M. Kotalik, Thaine ...
162
Voted
ECBS
2010
IEEE
230views Hardware» more  ECBS 2010»
15 years 7 months ago
A Model-Based Regression Testing Approach for Evolving Software Systems with Flexible Tool Support
Model-based selective regression testing promises reduction in cost and labour by selecting a subset of the test suite corresponding to the modifications after system evolution. H...
Qurat-ul-ann Farooq, Muhammad Zohaib Z. Iqbal, Zaf...
144
Voted
BMCBI
2006
130views more  BMCBI 2006»
15 years 3 months ago
An interactive visualization tool to explore the biophysical properties of amino acids and their contribution to substitution ma
Background: Quantitative descriptions of amino acid similarity, expressed as probabilistic models of evolutionary interchangeability, are central to many mainstream bioinformatic ...
Blazej Bulka, Marie desJardins, Stephen J. Freelan...