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» Framework for a Protein Ontology
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IJCAI
2003
15 years 2 months ago
Querying Distributed Data through Distributed Ontologies: A Simple but Scalable Approach
In this paper, we define a simple but scalable framework for peer-to-peer data sharing systems, in which the problem of answering queries over a network of semantically related p...
François Goasdoué, Marie-Christine R...
93
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ISMB
2000
15 years 2 months ago
Intelligent Aids for Parallel Experiment Planning and Macromolecular Crystallization
This paper presents a framework called Parallel Experiment Planning (PEP) that is based on an abstraction of how experiments are performed in the domain of macromolecular crystall...
Vanathi Gopalakrishnan, Bruce G. Buchanan, John M....
103
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APBC
2007
110views Bioinformatics» more  APBC 2007»
15 years 2 months ago
Fast Structural Similarity Search Based on Topology String Matching
ibe an abstract data model of protein structures by representing the geometry of proteins using spatial data types and present a framework for fast structural similarity search bas...
Sung-Hee Park, David Gilbert, Keun Ho Ryu
92
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ENTCS
2010
127views more  ENTCS 2010»
15 years 24 days ago
Combining Model Reductions
Molecular biological models usually suffer from a large combinatorial explosion. Indeed, proteins form complexes and modify each others, which leads to the formation of a huge num...
Ferdinanda Camporesi, Jérôme Feret, H...
AO
2007
119views more  AO 2007»
15 years 26 days ago
The model of roles within an ontology development tool: Hozo
One of the major goals of ontology is to represent properly the underlying conceptual structure of the messy world reflecting the reality as much as possible. Ontology building to...
Riichiro Mizoguchi, Eiichi Sunagawa, Kouji Kozaki,...