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» Framework for a Protein Ontology
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ASWEC
2000
IEEE
15 years 5 months ago
Storing and Retrieving Software Components: A Component Description Manager
The aim of the paper is to present the results of research into Component-Based software development by providing a specification mechanism allowing searching for components in a ...
Rune Meling, E. James Montgomery, Pon Sudha Ponnus...
113
Voted
BMCBI
2010
147views more  BMCBI 2010»
15 years 26 days ago
Learning biological network using mutual information and conditional independence
Background: Biological networks offer us a new way to investigate the interactions among different components and address the biological system as a whole. In this paper, a revers...
Dong-Chul Kim, Xiaoyu Wang, Chin-Rang Yang, Jean G...
137
Voted
BMCBI
2007
166views more  BMCBI 2007»
15 years 26 days ago
PathFinder: mining signal transduction pathway segments from protein-protein interaction networks
Background: A Signal transduction pathway is the chain of processes by which a cell converts an extracellular signal into a response. In most unicellular organisms, the number of ...
Gürkan Bebek, Jiong Yang
127
Voted
BMCBI
2008
147views more  BMCBI 2008»
15 years 26 days ago
Transmembrane helix prediction using amino acid property features and latent semantic analysis
Background: Prediction of transmembrane (TM) helices by statistical methods suffers from lack of sufficient training data. Current best methods use hundreds or even thousands of f...
Madhavi Ganapathiraju, Narayanas Balakrishnan, Raj...
BMCBI
2005
292views more  BMCBI 2005»
15 years 19 days ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...