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» Framework for a Protein Ontology
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IJIS
2007
93views more  IJIS 2007»
15 years 12 days ago
Perspectives on ontology-based querying
In this paper, we introduce principles for ontology-based querying of information bases. We consider a framework in which a basis ontology over atomic concepts in combination with ...
Rasmus Knappe, Henrik Bulskov, Troels Andreasen
96
Voted
SEMWEB
2010
Springer
14 years 10 months ago
A Feature and Information Theoretic Framework for Semantic Similarity and Relatedness
Abstract. Semantic similarity and relatedness measures between ontology concepts are useful in many research areas. While similarity only considers subsumption relations to assess ...
Giuseppe Pirrò, Jérôme Euzenat
103
Voted
ER
2009
Springer
166views Database» more  ER 2009»
15 years 7 months ago
A Modeling Ontology for Integrating Vulnerabilities into Security Requirements Conceptual Foundations
Abstract. Vulnerabilities are weaknesses in the requirements, design, and implementation, which attackers exploit to compromise the system. This paper proposes a vulnerability-cent...
Golnaz Elahi, Eric S. K. Yu, Nicola Zannone
77
Voted
SEMWEB
2005
Springer
15 years 6 months ago
Ontology Design Patterns for Semantic Web Content
The paper presents a framework for introducing design patterns that facilitate or improve the techniques used during ontology lifecycle. Some distinctions are drawn between kinds o...
Aldo Gangemi
NAR
2011
225views Computer Vision» more  NAR 2011»
14 years 3 months ago
IsoBase: a database of functionally related proteins across PPI networks
We describe IsoBase, a database identifying functionally related proteins, across five major eukaryotic model organisms: Saccharomyces cerevisiae, Drosophila melanogaster, Caenorh...
Daniel Park, Rohit Singh, Michael Baym, Chung-Shou...