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ICPPW
2009
IEEE
13 years 4 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
IJCV
2006
227views more  IJCV 2006»
13 years 6 months ago
A Multigrid Platform for Real-Time Motion Computation with Discontinuity-Preserving Variational Methods
Variational methods are among the most accurate techniques for estimating the optic flow. They yield dense flow fields and can be designed such that they preserve discontinuities, ...
Andrés Bruhn, Joachim Weickert, Timo Kohlbe...
BIRD
2008
Springer
162views Bioinformatics» more  BIRD 2008»
13 years 8 months ago
Suffix Tree Characterization of Maximal Motifs in Biological Sequences
Finding motifs in biological sequences is one of the most intriguing problems for string algorithms designers due to, on the one hand, the numerous applications of this problem in...
Maria Federico, Nadia Pisanti
NIPS
2008
13 years 7 months ago
Scalable Algorithms for String Kernels with Inexact Matching
We present a new family of linear time algorithms based on sufficient statistics for string comparison with mismatches under the string kernels framework. Our algorithms improve t...
Pavel P. Kuksa, Pai-Hsi Huang, Vladimir Pavlovic
JMLR
2012
11 years 8 months ago
Fast interior-point inference in high-dimensional sparse, penalized state-space models
We present an algorithm for fast posterior inference in penalized high-dimensional state-space models, suitable in the case where a few measurements are taken in each time step. W...
Eftychios A. Pnevmatikakis, Liam Paninski