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BMCBI
2011
12 years 10 months ago
Structator: fast index-based search for RNA sequence-structure patterns
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
Fernando Meyer, Stefan Kurtz, Rolf Backofen, Sebas...
QEST
2005
IEEE
13 years 12 months ago
iLTLChecker: A Probabilistic Model Checker for Multiple DTMCs
iLTL is a probabilistic temporal logic that can specify properties of multiple discrete time Markov chains (DTMCs). In this paper, we describe two related tools: MarkovEstimator a...
YoungMin Kwon, Gul A. Agha
IDA
2002
Springer
13 years 6 months ago
Classification with sparse grids using simplicial basis functions
Recently we presented a new approach [20] to the classification problem arising in data mining. It is based on the regularization network approach but in contrast to other methods...
Jochen Garcke, Michael Griebel
BMCBI
2007
143views more  BMCBI 2007»
13 years 6 months ago
An adaptive bin framework search method for a beta-sheet protein homopolymer model
Background: The problem of protein structure prediction consists of predicting the functional or native structure of a protein given its linear sequence of amino acids. This probl...
Alena Shmygelska, Holger H. Hoos
IPPS
2006
IEEE
14 years 10 days ago
GPU-ABiSort: optimal parallel sorting on stream architectures
In this paper, we present a novel approach for parallel sorting on stream processing architectures. It is based on adaptive bitonic sorting. For sorting n values utilizing p strea...
Alexander Greß, Gabriel Zachmann