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» From Algorithmic to Subjective Randomness
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150
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BMCBI
2010
110views more  BMCBI 2010»
15 years 3 months ago
TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach
Background: One of main aims of Molecular Biology is the gain of knowledge about how molecular components interact each other and to understand gene function regulations. Using mi...
Pietro Zoppoli, Sandro Morganella, Michele Ceccare...
144
Voted
STOC
2005
ACM
110views Algorithms» more  STOC 2005»
16 years 4 months ago
Key agreement from weak bit agreement
Assume that Alice and Bob, given an authentic channel, have a protocol where they end up with a bit SA and SB, respectively, such that with probability 1+ 2 these bits are equal. ...
Thomas Holenstein
130
Voted
BMCBI
2010
154views more  BMCBI 2010»
15 years 3 months ago
An algorithm for automated closure during assembly
Background: Finishing is the process of improving the quality and utility of draft genome sequences generated by shotgun sequencing and computational assembly. Finishing can invol...
Sergey Koren, Jason R. Miller, Brian Walenz, Grang...
JCC
2007
70views more  JCC 2007»
15 years 3 months ago
Self-organizing superimposition algorithm for conformational sampling
Abstract: A novel self-organizing algorithm for conformational sampling is introduced, in which precomputed conformations of rigid fragments are used as templates to enforce the de...
Fangqiang Zhu, Dimitris K. Agrafiotis
143
Voted
FSTTCS
2006
Springer
15 years 7 months ago
Approximation Algorithms for 2-Stage Stochastic Optimization Problems
Abstract. Stochastic optimization is a leading approach to model optimization problems in which there is uncertainty in the input data, whether from measurement noise or an inabili...
Chaitanya Swamy, David B. Shmoys