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AMAST
2008
Springer
14 years 11 months ago
Generating Specialized Rules and Programs for Demand-Driven Analysis
Many complex analysis problems can be most clearly and easily specified as logic rules and queries, where rules specify how given facts can be combined to infer new facts, and quer...
K. Tuncay Tekle, Katia Hristova, Yanhong A. Liu
RECOMB
2006
Springer
15 years 10 months ago
Leveraging Information Across HLA Alleles/Supertypes Improves Epitope Prediction
We present a model for predicting HLA class I restricted CTL epitopes. In contrast to almost all other work in this area, we train a single model on epitopes from all HLA alleles a...
David Heckerman, Carl Myers Kadie, Jennifer Listga...
WABI
2007
Springer
15 years 3 months ago
Predicting Protein Folding Kinetics Via Temporal Logic Model Checking
Christopher James Langmead⋆ and Sumit Kumar Jha Department of Computer Science, Carnegie Mellon University We present a novel approach for predicting protein folding kinetics us...
Christopher James Langmead, Sumit Kumar Jha
LICS
2005
IEEE
15 years 3 months ago
Uniform Distributed Synthesis
We provide a uniform solution to the problem of synthesizing a finite-state distributed system. An instance of the synthesis problem consists of a system architecture and a tempo...
Bernd Finkbeiner, Sven Schewe
UC
2005
Springer
15 years 3 months ago
On Model-Checking of P Systems
Abstract. Membrane computing is a branch of molecular computing that aims to develop models and paradigms that are biologically motivated. It identifies an unconventional computin...
Zhe Dang, Oscar H. Ibarra, Cheng Li, Gaoyan Xie