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BMCBI
2007
101views more  BMCBI 2007»
15 years 5 months ago
Statistical validation of megavariate effects in ASCA
Background: Innovative extensions of (M) ANOVA gain common ground for the analysis of designed metabolomics experiments. ASCA is such a multivariate analysis method; it has succes...
Daniel J. Vis, Johan A. Westerhuis, Age K. Smilde,...
BMCBI
2008
118views more  BMCBI 2008»
15 years 5 months ago
Kismeth: Analyzer of plant methylation states through bisulfite sequencing
Background: There is great interest in probing the temporal and spatial patterns of cytosine methylation states in genomes of a variety of organisms. It is hoped that this will sh...
Eyal Gruntman, Yijun Qi, R. Keith Slotkin, Ted Roe...
BMCBI
2008
138views more  BMCBI 2008»
15 years 5 months ago
Using neural networks and evolutionary information in decoy discrimination for protein tertiary structure prediction
Background: We present a novel method of protein fold decoy discrimination using machine learning, more specifically using neural networks. Here, decoy discrimination is represent...
Ching-Wai Tan, David T. Jones
BMCBI
2008
139views more  BMCBI 2008»
15 years 5 months ago
New challenges for text mining: mapping between text and manually curated pathways
Background: Associating literature with pathways poses new challenges to the Text Mining (TM) community. There are three main challenges to this task: (1) the identification of th...
Kanae Oda, Jin-Dong Kim, Tomoko Ohta, Daisuke Okan...
BMCBI
2008
163views more  BMCBI 2008»
15 years 5 months ago
i-SEGOPubmed: a web interface for semantic enabled browsing of PubMed using Gene Ontology
imately 20 million abstracts. Browsing such a huge repository to find relevant information as well as providing elearning service requires new generation of interfaces. Methods suc...
Mohammed Yeasin, Bhanu Vanteru, Jahangheer S. Shai...
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