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PVLDB
2010
184views more  PVLDB 2010»
15 years 29 days ago
TimeTrails: A System for Exploring Spatio-Temporal Information in Documents
Spatial and temporal data have become ubiquitous in many application domains such as the Geosciences or life sciences. Sophisticated database management systems are employed to ma...
Jannik Strötgen, Michael Gertz
BMCBI
2006
249views more  BMCBI 2006»
15 years 2 months ago
Gene functional similarity search tool (GFSST)
Background: With the completion of the genome sequences of human, mouse, and other species and the advent of high throughput functional genomic research technologies such as biomi...
Peisen Zhang, Jinghui Zhang, Huitao Sheng, James J...
121
Voted
WWW
2010
ACM
15 years 9 months ago
Sampling community structure
We propose a novel method, based on concepts from expander graphs, to sample communities in networks. We show that our sampling method, unlike previous techniques, produces subgra...
Arun S. Maiya, Tanya Y. Berger-Wolf
BMCBI
2007
265views more  BMCBI 2007»
15 years 2 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
156
Voted
ICDE
2012
IEEE
240views Database» more  ICDE 2012»
13 years 5 months ago
Approximate Shortest Distance Computing: A Query-Dependent Local Landmark Scheme
—Shortest distance query between two nodes is a fundamental operation in large-scale networks. Most existing methods in the literature take a landmark embedding approach, which s...
Miao Qiao, Hong Cheng, Lijun Chang, Jeffrey Xu Yu