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JCC
2008
88views more  JCC 2008»
15 years 3 months ago
A self-organizing algorithm for molecular alignment and pharmacophore development
Abstract: We present a method for simultaneous three-dimensional (3D) structure generation and pharmacophorebased alignment using a self-organizing algorithm called Stochastic Prox...
Deepak Bandyopadhyay, Dimitris K. Agrafiotis
166
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OOPSLA
2007
Springer
15 years 9 months ago
Statistically rigorous java performance evaluation
Java performance is far from being trivial to benchmark because it is affected by various factors such as the Java application, its input, the virtual machine, the garbage collect...
Andy Georges, Dries Buytaert, Lieven Eeckhout
201
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EDBT
2009
ACM
302views Database» more  EDBT 2009»
15 years 10 months ago
RankClus: integrating clustering with ranking for heterogeneous information network analysis
As information networks become ubiquitous, extracting knowledge from information networks has become an important task. Both ranking and clustering can provide overall views on in...
Yizhou Sun, Jiawei Han, Peixiang Zhao, Zhijun Yin,...
135
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BMCBI
2010
115views more  BMCBI 2010»
15 years 3 months ago
Multiconstrained gene clustering based on generalized projections
Background: Gene clustering for annotating gene functions is one of the fundamental issues in bioinformatics. The best clustering solution is often regularized by multiple constra...
Jia Zeng, Shanfeng Zhu, Alan Wee-Chung Liew, Hong ...
110
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COMBINATORICS
2004
112views more  COMBINATORICS 2004»
15 years 3 months ago
Airy Phenomena and Analytic Combinatorics of Connected Graphs
Until now, the enumeration of connected graphs has been dealt with by probabilistic methods, by special combinatorial decompositions or by somewhat indirect formal series manipula...
Philippe Flajolet, Bruno Salvy, Gilles Schaeffer