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BMCBI
2004
200views more  BMCBI 2004»
14 years 11 months ago
ABC: software for interactive browsing of genomic multiple sequence alignment data
Background: Alignment and comparison of related genome sequences is a powerful method to identify regions likely to contain functional elements. Such analyses are data intensive, ...
Gregory M. Cooper, Senthil A. G. Singaravelu, Aren...
CSB
2003
IEEE
15 years 5 months ago
Search for Evolution-Related-Oligonucleotides and Conservative Words in rRNA Sequences
We describe a method for finding ungapped conserved words in rRNA sequences that is effective, utilizes evolutionary information and does not depend on multiple sequence alignment...
Liaofu Luo, Li-Ching Hsieh, Fengmin Ji, Mengwen Ji...
WADS
1997
Springer
88views Algorithms» more  WADS 1997»
15 years 3 months ago
Finding Cores of Limited Length
In this paper we consider the problem of nding a core of limited length in a tree. A core is a path, which minimizes the sum of the distances to all nodes in the tree. This proble...
Stephen Alstrup, Peter W. Lauridsen, Peer Sommerlu...
IJCAI
2007
15 years 1 months ago
Automated Design of Multistage Mechanisms
Mechanism design is the study of preference aggregation protocols that work well in the face of self-interested agents. We present the first general-purpose techniques for automa...
Tuomas Sandholm, Vincent Conitzer, Craig Boutilier
KDD
2004
ACM
126views Data Mining» more  KDD 2004»
16 years 5 days ago
Turning CARTwheels: an alternating algorithm for mining redescriptions
We present an unusual algorithm involving classification trees-CARTwheels--where two trees are grown in opposite directions so that they are joined at their leaves. This approach ...
Naren Ramakrishnan, Deept Kumar, Bud Mishra, Malco...